Data science

PyCharm for data science on Windows — Conda, Jupyter & Scientific Mode

PyCharm supports data science on Windows through Scientific Mode, Jupyter notebooks (Professional), and integration with Conda, pandas, matplotlib and NumPy. Scientific Mode shows plots inline and provides a variable explorer similar to Jupyter.

Set up PyCharm for data science on Windows

  • 1

    Install Miniconda

    Download Miniconda for Windows. This gives you Python + Conda in a minimal footprint.

  • 2

    Create a data science environment

    Anaconda Prompt
    (base)> conda create -n ds python=3.11
    (base)> conda activate ds
    (ds)> conda install pandas numpy matplotlib scikit-learn jupyter
  • 3

    Configure in PyCharm

    File → Settings → Python Interpreter → Add → Conda → select the ds environment. See Conda guide.

  • 4

    Enable Scientific Mode

    View → Scientific Mode. This enables inline plot display, variable explorer and interactive console.

Jupyter notebooks in PyCharm

PyCharm Professional has full Jupyter notebook support (.ipynb files). PyCharm Community has limited Jupyter support via the scientific mode.

With Professional: open any .ipynb file and it renders as an interactive notebook. Run cells with Shift+Enter, add cells, see output inline.

PyCharm Community users: use the built-in terminal to run jupyter notebook and work in the browser, then use PyCharm for .py files.

Data science questions

PyCharm vs Jupyter for data science — which is better?

They are complementary. Jupyter notebooks are better for exploration, visualisation and sharing results. PyCharm is better for writing production code, debugging and refactoring. Many data scientists use both: Jupyter for exploration, PyCharm for building clean Python modules and packages from the notebook code.

pycharm conda — why not just use Jupyter lab?

PyCharm gives you a full IDE experience: code completion, refactoring, version control integration, testing and debugging. JupyterLab is better for notebook-style work. For a project that has both notebooks and .py modules (which most real data science projects do), PyCharm Professional handles both in one IDE.

Setting up Conda?

Configure Anaconda environment in PyCharm.

Conda guide